Create a new pepdiff_data object

Low-level constructor for pepdiff_data objects. Use [read_pepdiff()] for user-facing data import.

Usage

new_pepdiff_data(data, factors, design, missingness, peptides, call)

Arguments

data

A tibble with peptide, gene_id, factor columns, bio_rep, value

factors

Character vector of factor column names

design

Tibble of unique factor combinations with counts

missingness

Tibble of peptide missingness statistics

peptides

Character vector of unique peptide IDs

call

The original function call

Value

A pepdiff_data object